Many of our clients in the consumer goods industry see the negative effects of the lack of centralised data management solutions on the efficiency of their R&D processes. We provide an extensible and flexible infrastructure capturing raw multi-omics data, metadata, pipeline results, intermediate files and analysis reports. The platform streamlines importing of complex data and offers consistency constraints on metadata to standardise the way users describe their datasets.
Leveraging existing public datasets and analysing them alongside private data holds great potential, as some insights are only visible at scale. Genestack’s faceted search interface allows users to browse through a wealth of private, shared and public data and find relevant experiments easily, using full-text search across metadata attributes, with synonym awareness and ontology expansion capabilities. We indexed millions of assays from more than 100 000 experiments available in public genomic databases such as SRA, ENA, GEO and ArrayExpress.
Using Genestack, researchers can answer complex biological questions without the need to learn specialised computational skills. Our system helps the users by suggesting best analytical approaches for their data and our interactive visual applications allow for deeper results interpretation.
Genestack provides bioinformaticians with a powerful, flexible and robust interface to build and manage interactive bioinformatics apps. Developed applications are easily integrated with the rest of the system and ready to be used.